STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSE_26470Hypothetical protein. (184 aa)    
Predicted Functional Partners:
KSE_72730
Putative metal-binding protein.
  
 0.975
KSE_36100
Putative metal transporter ATPase.
   
 0.971
KSE_54470
Hypothetical protein; Similar to Copper chaperone CopZ in Bacillus subtilis (O32221).
   
 0.971
KSE_70260
Hypothetical protein.
   
 0.971
sodF
Putative superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.940
qcrB
Putative menaquinol-cytochrome c reductase cytochrome b subunit.
    
 
 0.928
KSE_34500
Hypothetical protein.
    
   0.858
KSE_41010
Hypothetical protein.
    
   0.858
KSE_16960
Putative thioredoxin.
   
 0.823
KSE_33280
Putative thiol-disulfide oxidoreductase.
   
 0.823
Your Current Organism:
Kitasatospora setae
NCBI taxonomy Id: 452652
Other names: K. setae KM-6054, Kitasatospora setae KM-6054, Kitasatospora setae str. KM-6054, Kitasatospora setae strain KM-6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.