STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSE_36620Hypothetical protein. (383 aa)    
Predicted Functional Partners:
KSE_36630
Putative RNA polymerase ECF subfamily sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.886
KSE_43550
Hypothetical protein.
  
     0.774
KSE_49240
Hypothetical protein.
  
     0.770
KSE_43540
Hypothetical protein.
  
     0.769
KSE_50360
Hypothetical protein.
  
     0.769
KSE_33030
Putative TetR family transcriptional regulator.
  
     0.767
KSE_66220
Hypothetical protein.
  
     0.766
KSE_25940
Hypothetical protein.
  
     0.765
nsdA
Putative regulatory protein.
  
     0.764
KSE_66200
Putative chaplin.
  
     0.763
Your Current Organism:
Kitasatospora setae
NCBI taxonomy Id: 452652
Other names: K. setae KM-6054, Kitasatospora setae KM-6054, Kitasatospora setae str. KM-6054, Kitasatospora setae strain KM-6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.