STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI94843.1Conserved hypothetical protein. (103 aa)    
Predicted Functional Partners:
BAI94842.1
Conserved hypothetical protein; Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.891
ptsN
PTS system nitrogen regulatory IIA component; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
     
 0.841
rpoN
Sigma 54; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
     
 0.779
BAI95099.1
Ribonuclease G or E.
  
    0.777
BAI95147.1
Putative polysaccharide transporter; Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.770
BAI97235.1
Conserved hypothetical protein.
  
     0.770
BAI97650.1
Hypothetical protein.
  
     0.762
BAI97740.1
Hypothetical protein.
  
     0.760
BAI96113.1
Uncharacterized protein conserved in bacteria.
  
     0.758
BAI96289.1
Conserved hypothetical protein; Putative membrane protein/domain.
  
     0.751
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.