STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI94908.1FOG: TPR repeat, SEL1 subfamily. (98 aa)    
Predicted Functional Partners:
cpaA-2
Flp pilus assembly protein protease CpaA.
  
     0.724
BAI96111.1
Uncharacterized protein conserved in bacteria.
  
     0.678
BAI96426.1
Uncharacterized protein conserved in bacteria.
  
     0.614
cpaA
Flp pilus assembly protein protease CpaA.
  
     0.601
BAI98211.1
ATPase of the AAA+ class.
   
 0.585
BAI96100.1
Hypothetical protein.
 
 
 
 0.569
BAI98279.1
Uncharacterized protein conserved in bacteria.
  
     0.565
cpaE-2
Flp pilus assembly protein ATPase CpaE.
  
     0.561
BAI97037.1
YapH-family protein; Outer membrane autotransporter barrel protein / uncharacterized protein with a C-terminal OMP (outer membrane protein) domain.
 
     0.531
BAI95852.1
SleB-like protein; Cell wall hydrolyse involved in spore germination.
  
     0.509
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.