STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI95252.1Putative integrase; Site-specific recombinase XerC; Belongs to the 'phage' integrase family. (463 aa)    
Predicted Functional Partners:
BAI95254.1
Hypothetical protein.
 
     0.948
BAI95253.1
Hypothetical protein.
 
     0.946
ardC-2
Antirestriction protein.
 
     0.783
BAI97826.1
Hypothetical protein.
 
     0.783
BAI97827.1
Hypothetical protein.
  
     0.774
ardC-3
Antirestriction protein ArdC; Remnant.
 
     0.705
arsR
ArsR-family transcriptional regulator.
       0.628
BAI96860.1
Hypothetical protein.
  
     0.620
BAI96682.1
Hypothetical protein.
  
     0.618
BAI96861.1
Hypothetical protein.
  
     0.615
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.