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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI95428.1GntR-family transcriptional regulator. (251 aa)    
Predicted Functional Partners:
BAI95430.1
Putative sugar transporter; Uncharacterized protein conserved in bacteria.
 
     0.831
BAI95429.1
D-galactose 1-dehydrogenase; Putative dehydrogenase or related protein / oxidoreductase.
 
     0.813
BAI95431.1
NAD-dependent aldehyde dehydrogenase.
 
     0.764
BAI95432.1
Phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
     0.737
BAI98451.1
GntR-family transcriptional regulator.
 
  
 0.643
dgoK
2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase.
 
  
 0.639
dgoAa
2-keto-3-deoxy-6-phosphogluconate aldolase.
 
   
 0.614
BAI95061.1
Glv operon transcriptional regulator.
  
  
 0.530
rspA
Starvation sensing protein RspA.
   
 0.506
BAI98717.1
GntR-family transcriptional regulator.
 
  
 0.481
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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