STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI95698.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
ftsK
DNA segregation ATPase FtsK; SpoIIIE, S-DNA-T family.
   
 
 0.768
BAI95697.1
Hypothetical protein.
       0.701
BAI98565.1
Putative cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 
 0.595
BAI95553.1
Putative bi-functional transferase/deacetylase; Glycosyltransferase, probably involved in cell wall biogenesis / putative xylanase / chitin deacetylase.
     
 0.515
BAI95242.1
Putative subtilisin proteinase-like protein.
  
 
 0.486
BAI96405.1
Subtilisin-like serine protease.
  
 
 0.486
pepo
Putative endopeptidase/metallopeptidase.
  
    0.408
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.