Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI97270.1 | BAI97588.1 | SJA_C1-24360 | SJA_C1-27540 | Conserved hypothetical protein; Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Conserved hypothetical protein; Putative membrane protein. | 0.470 |
BAI97270.1 | BAI98774.1 | SJA_C1-24360 | SJA_C2-04110 | Conserved hypothetical protein; Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Hypothetical protein. | 0.624 |
BAI97588.1 | BAI97270.1 | SJA_C1-27540 | SJA_C1-24360 | Conserved hypothetical protein; Putative membrane protein. | Conserved hypothetical protein; Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.470 |
BAI97588.1 | BAI98724.1 | SJA_C1-27540 | SJA_C2-03610 | Conserved hypothetical protein; Putative membrane protein. | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | 0.504 |
BAI97588.1 | BAI98774.1 | SJA_C1-27540 | SJA_C2-04110 | Conserved hypothetical protein; Putative membrane protein. | Hypothetical protein. | 0.503 |
BAI97588.1 | sodA | SJA_C1-27540 | SJA_C1-27550 | Conserved hypothetical protein; Putative membrane protein. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.528 |
BAI98724.1 | BAI97588.1 | SJA_C2-03610 | SJA_C1-27540 | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | Conserved hypothetical protein; Putative membrane protein. | 0.504 |
BAI98774.1 | BAI97270.1 | SJA_C2-04110 | SJA_C1-24360 | Hypothetical protein. | Conserved hypothetical protein; Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.624 |
BAI98774.1 | BAI97588.1 | SJA_C2-04110 | SJA_C1-27540 | Hypothetical protein. | Conserved hypothetical protein; Putative membrane protein. | 0.503 |
sodA | BAI97588.1 | SJA_C1-27550 | SJA_C1-27540 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Conserved hypothetical protein; Putative membrane protein. | 0.528 |