Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI98104.1 | BAI98105.1 | SJA_C1-32700 | SJA_C1-32710 | Dioxygenase related to 2-nitropropane dioxygenase. | SDR-family protein; Remnant; short-chain dehydrogenase/reductase (SDR) family protein. | 0.662 |
BAI98104.1 | BAI98106.1 | SJA_C1-32700 | SJA_C1-32720 | Dioxygenase related to 2-nitropropane dioxygenase. | Hypothetical protein. | 0.658 |
BAI98104.1 | BAI98107.1 | SJA_C1-32700 | SJA_C1-32730 | Dioxygenase related to 2-nitropropane dioxygenase. | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | 0.496 |
BAI98105.1 | BAI98104.1 | SJA_C1-32710 | SJA_C1-32700 | SDR-family protein; Remnant; short-chain dehydrogenase/reductase (SDR) family protein. | Dioxygenase related to 2-nitropropane dioxygenase. | 0.662 |
BAI98105.1 | BAI98106.1 | SJA_C1-32710 | SJA_C1-32720 | SDR-family protein; Remnant; short-chain dehydrogenase/reductase (SDR) family protein. | Hypothetical protein. | 0.773 |
BAI98105.1 | BAI98107.1 | SJA_C1-32710 | SJA_C1-32730 | SDR-family protein; Remnant; short-chain dehydrogenase/reductase (SDR) family protein. | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | 0.576 |
BAI98106.1 | BAI98104.1 | SJA_C1-32720 | SJA_C1-32700 | Hypothetical protein. | Dioxygenase related to 2-nitropropane dioxygenase. | 0.658 |
BAI98106.1 | BAI98105.1 | SJA_C1-32720 | SJA_C1-32710 | Hypothetical protein. | SDR-family protein; Remnant; short-chain dehydrogenase/reductase (SDR) family protein. | 0.773 |
BAI98106.1 | BAI98107.1 | SJA_C1-32720 | SJA_C1-32730 | Hypothetical protein. | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | 0.576 |
BAI98107.1 | BAI98104.1 | SJA_C1-32730 | SJA_C1-32700 | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | Dioxygenase related to 2-nitropropane dioxygenase. | 0.496 |
BAI98107.1 | BAI98105.1 | SJA_C1-32730 | SJA_C1-32710 | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | SDR-family protein; Remnant; short-chain dehydrogenase/reductase (SDR) family protein. | 0.576 |
BAI98107.1 | BAI98106.1 | SJA_C1-32730 | SJA_C1-32720 | TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport. | Hypothetical protein. | 0.576 |