STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI98496.1ABC-type transport system periplasmic component; Sulfonate/nitrate/taurine transport system substrate-binding protein. (360 aa)    
Predicted Functional Partners:
BAI98497.1
Sulfonate/nitrate/taurine transport system permease protein.
 
  
 0.965
BAI98498.1
ABC-type transport system ATPase component; Spermidine/putrescine transport system ATP-binding protein.
 
  
 0.958
BAI98502.1
Allophanate hydrolase subunit 2 precursor / urea amidolyase-related protein (EC 6.3.4.6) / biotin carboxylase.
 
   
 0.945
BAI98500.1
Conserved hypothetical protein.
 
     0.939
BAI98503.1
Putative amidase; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase.
 
  
 0.902
BAI98501.1
Conserved hypothetical protein.
 
     0.893
nikR
CopG-family transcriptional regulator; Transcriptional regulator.
 
     0.809
BAI98796.1
Sulfonate/nitrate/taurine transport system permease protein.
 
  
 0.634
ssuB
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; ATP-binding protein.
 
  
 0.612
BAI98504.1
Conserved hypothetical protein.
 
    0.575
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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