STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qor-2NADPH:quinone reductase or related Zn-dependent oxidoreductase. (332 aa)    
Predicted Functional Partners:
BAI98772.1
Acyl dehydratase.
 
 0.980
BAI98775.1
Putative aminoglycoside phosphotransferase.
 
   0.841
BAI98774.1
Hypothetical protein.
  
   0.799
BAI98776.1
SDR-family protein; Short-chain dehydrogenase/reductase (SDR) family protein.
  
   0.795
BAI98770.1
Hypothetical protein.
       0.576
BAI98771.1
Putative dioxygenase; Rieske (2Fe-2S) domain protein / phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit.
       0.576
BAI98777.1
TonB-dependent receptor-like protein; Outer membrane receptor protein, mostly Fe transport.
       0.531
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.506
BAI98769.1
Putative acyl-CoA dehydrogenase.
  
 
 0.467
ydhD
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.449
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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