STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A120K0Q8HBL303Wp. (113 aa)    
Predicted Functional Partners:
A0A120K1U7
HCL392Cp; Belongs to the SKP1 family.
   
 0.999
A0A0X8HW41
HHL191Wp; Belongs to the SKP1 family.
   
 0.996
A0A0X8HRG1
HCL059Wp; Belongs to the cullin family.
    
 0.994
A0A0X8HVM8
HGL025Wp.
    
 0.994
A0A109V069
HGR043Wp; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.988
A0A109V0I4
HHL167Cp; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.961
A0A109UWT6
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.958
A0A0X8HRT3
HDL470Cp; Belongs to the cullin family.
    
 0.943
A0A109UXM4
HBR520Wp.
   
 0.942
A0A0X8HRC2
HCL148Wp.
    
 0.932
Your Current Organism:
Eremothecium sinecaudum
NCBI taxonomy Id: 45286
Other names: ATCC 58844, CBS 8199, CCRC 21344, CCRC:21344, DAOM 187446, E. sinecaudum, Eremothecium sinecaudum (Holley) Kurtzman, Holleya sinecauda, NRRL Y-17231, Nematospora sinecauda
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