STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A120K1K1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (338 aa)    
Predicted Functional Partners:
A0A0X8HS60
HDL259Cp.
   
 0.999
A0A0X8HTS3
HEL005Wp.
   
 0.999
AW171_hschr253
HBL354Wp.
   
 0.999
A0A109UZ34
HDL256Cp.
   
 0.999
A0A109V0H4
HHR018Cp.
   
 0.999
A0A120K113
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
A0A120K200
HCL185Wp.
   
 0.999
A0A120K2E4
HEL010Wp.
   
 0.999
A0A120K2L9
HFR092Cp.
   
 0.999
A0A0X8HSR4
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.998
Your Current Organism:
Eremothecium sinecaudum
NCBI taxonomy Id: 45286
Other names: ATCC 58844, CBS 8199, CCRC 21344, CCRC:21344, DAOM 187446, E. sinecaudum, Eremothecium sinecaudum (Holley) Kurtzman, Holleya sinecauda, NRRL Y-17231, Nematospora sinecauda
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