STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A120K261U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (698 aa)    
Predicted Functional Partners:
A0A0X8HS60
HDL259Cp.
   
 0.999
A0A0X8HSJ5
U3 small nucleolar RNA-associated protein 22.
   
 0.993
A0A109UZ34
HDL256Cp.
   
 0.992
AW171_hschr261
HBL347Cp.
   
 0.992
A0A0X8HWI4
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.991
A0A0X8HSY6
HDR152Cp.
   
 0.990
A0A0X8HTK4
HEL095Cp.
   
 
 0.987
A0A0X8HR73
HCL204Cp.
   
 0.986
AW171_hschr253
HBL354Wp.
   
 
 0.986
A0A109UZ57
HDL166Wp.
   
 
 0.984
Your Current Organism:
Eremothecium sinecaudum
NCBI taxonomy Id: 45286
Other names: ATCC 58844, CBS 8199, CCRC 21344, CCRC:21344, DAOM 187446, E. sinecaudum, Eremothecium sinecaudum (Holley) Kurtzman, Holleya sinecauda, NRRL Y-17231, Nematospora sinecauda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.