STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A120K2D7HEL054Cp. (1119 aa)    
Predicted Functional Partners:
A0A0X8HRE0
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A0X8HSG1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A0X8HT14
HER032Wp; Belongs to the WD repeat SEC13 family.
   
 0.999
A0A0X8HTL7
HEL030Cp; Belongs to the WD repeat SEC13 family.
    
 0.999
A0A0X8HWW1
HHR160Wp.
   
 0.999
A0A109V0L6
HHL032Cp.
   
 0.999
A0A109UZM0
HFL329Wp.
   
 0.994
A0A109V167
HHR229Wp.
   
 0.988
A0A0X8HVL3
Nuclear pore protein.
   
 0.987
A0A0X8HWG4
HHL033Wp.
   
 0.985
Your Current Organism:
Eremothecium sinecaudum
NCBI taxonomy Id: 45286
Other names: ATCC 58844, CBS 8199, CCRC 21344, CCRC:21344, DAOM 187446, E. sinecaudum, Eremothecium sinecaudum (Holley) Kurtzman, Holleya sinecauda, NRRL Y-17231, Nematospora sinecauda
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