node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Achl_0809 | pnp | Achl_0809 | Achl_1439 | KEGG: aau:AAur_0817 hypothetical protein. | Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.949 |
Achl_0809 | rho | Achl_0809 | Achl_2353 | KEGG: aau:AAur_0817 hypothetical protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.575 |
Achl_0809 | rplT | Achl_0809 | Achl_1482 | KEGG: aau:AAur_0817 hypothetical protein. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.620 |
Achl_0809 | rpoA | Achl_0809 | Achl_2655 | KEGG: aau:AAur_0817 hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.576 |
Achl_0809 | rpoB | Achl_0809 | Achl_2697 | KEGG: aau:AAur_0817 hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.725 |
Achl_0809 | rpsO | Achl_0809 | Achl_1438 | KEGG: aau:AAur_0817 hypothetical protein. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.801 |
Achl_0809 | truB | Achl_0809 | Achl_1432 | KEGG: aau:AAur_0817 hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.773 |
Achl_2147 | Achl_2505 | Achl_2147 | Achl_2505 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: art:Arth_2393 ribonuclease, Rne/Rng family. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | 0.586 |
Achl_2147 | Achl_3499 | Achl_2147 | Achl_3499 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: art:Arth_2393 ribonuclease, Rne/Rng family. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_3772 DEAD/DEAH box helicase domain protein. | 0.586 |
Achl_2147 | pnp | Achl_2147 | Achl_1439 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: art:Arth_2393 ribonuclease, Rne/Rng family. | Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.946 |
Achl_2147 | rho | Achl_2147 | Achl_2353 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: art:Arth_2393 ribonuclease, Rne/Rng family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.458 |
Achl_2505 | Achl_2147 | Achl_2505 | Achl_2147 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: art:Arth_2393 ribonuclease, Rne/Rng family. | 0.586 |
Achl_2505 | pnp | Achl_2505 | Achl_1439 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.846 |
Achl_2505 | rplT | Achl_2505 | Achl_1482 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.439 |
Achl_2505 | rpoA | Achl_2505 | Achl_2655 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.571 |
Achl_2505 | rpoB | Achl_2505 | Achl_2697 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.549 |
Achl_2505 | rpsO | Achl_2505 | Achl_1438 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.563 |
Achl_2505 | truB | Achl_2505 | Achl_1432 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_2785 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.605 |
Achl_3499 | Achl_2147 | Achl_3499 | Achl_2147 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_3772 DEAD/DEAH box helicase domain protein. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: art:Arth_2393 ribonuclease, Rne/Rng family. | 0.586 |
Achl_3499 | pnp | Achl_3499 | Achl_1439 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: art:Arth_3772 DEAD/DEAH box helicase domain protein. | Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.855 |