STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Achl_1764PFAM: SNARE associated Golgi protein; KEGG: art:Arth_0238 DedA family protein. (223 aa)    
Predicted Functional Partners:
Achl_1763
PFAM: sodium/hydrogen exchanger; KEGG: aau:AAur_2006 putative Na+/H+ antiporter.
  
    0.773
Achl_0744
PFAM: SNARE associated Golgi protein; KEGG: aau:AAur_0766 DedA family membrane protein.
  
     0.628
Achl_1765
PFAM: protein of unknown function DUF1206; KEGG: rha:RHA1_ro04194 hypothetical protein.
       0.518
Achl_1762
PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sen:SACE_7272 FAD linked oxidase-like.
       0.516
Achl_1216
PFAM: SNARE associated Golgi protein; KEGG: art:Arth_1143 conserved protein DedA family.
  
     0.467
Your Current Organism:
Pseudarthrobacter chlorophenolicus
NCBI taxonomy Id: 452863
Other names: Arthrobacter chlorophenolicus A6, P. chlorophenolicus A6, Pseudarthrobacter chlorophenolicus A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.