node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Achl_0002 | nucS | Achl_0002 | Achl_2332 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.646 |
Achl_1545 | Achl_2321 | Achl_1545 | Achl_2321 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | KEGG: art:Arth_2589 hypothetical protein. | 0.713 |
Achl_1545 | Achl_2473 | Achl_1545 | Achl_2473 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | KEGG: art:Arth_2751 hypothetical protein. | 0.676 |
Achl_1545 | Achl_3092 | Achl_1545 | Achl_3092 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: art:Arth_3293 phosphoglycerate mutase. | 0.737 |
Achl_1545 | nucS | Achl_1545 | Achl_2332 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.680 |
Achl_1545 | rpoZ | Achl_1545 | Achl_1995 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.799 |
Achl_1545 | whiB-2 | Achl_1545 | Achl_2428 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.764 |
Achl_2321 | Achl_1545 | Achl_2321 | Achl_1545 | KEGG: art:Arth_2589 hypothetical protein. | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | 0.713 |
Achl_2321 | Achl_2473 | Achl_2321 | Achl_2473 | KEGG: art:Arth_2589 hypothetical protein. | KEGG: art:Arth_2751 hypothetical protein. | 0.479 |
Achl_2321 | Achl_2581 | Achl_2321 | Achl_2581 | KEGG: art:Arth_2589 hypothetical protein. | TIGRFAM: IMP dehydrogenase family protein; KEGG: art:Arth_2874 inositol-5-monophosphate dehydrogenase. | 0.681 |
Achl_2321 | Achl_3092 | Achl_2321 | Achl_3092 | KEGG: art:Arth_2589 hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: art:Arth_3293 phosphoglycerate mutase. | 0.601 |
Achl_2321 | nucS | Achl_2321 | Achl_2332 | KEGG: art:Arth_2589 hypothetical protein. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.693 |
Achl_2321 | rpoZ | Achl_2321 | Achl_1995 | KEGG: art:Arth_2589 hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.532 |
Achl_2321 | whiB-2 | Achl_2321 | Achl_2428 | KEGG: art:Arth_2589 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.765 |
Achl_2331 | Achl_2336 | Achl_2331 | Achl_2336 | KEGG: art:Arth_2598 putative ATP/GTP-binding protein, doubtful CDS. | KEGG: art:Arth_2603 hypothetical protein. | 0.726 |
Achl_2331 | nucS | Achl_2331 | Achl_2332 | KEGG: art:Arth_2598 putative ATP/GTP-binding protein, doubtful CDS. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.834 |
Achl_2331 | rpoZ | Achl_2331 | Achl_1995 | KEGG: art:Arth_2598 putative ATP/GTP-binding protein, doubtful CDS. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.404 |
Achl_2336 | Achl_2331 | Achl_2336 | Achl_2331 | KEGG: art:Arth_2603 hypothetical protein. | KEGG: art:Arth_2598 putative ATP/GTP-binding protein, doubtful CDS. | 0.726 |
Achl_2336 | nucS | Achl_2336 | Achl_2332 | KEGG: art:Arth_2603 hypothetical protein. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.688 |
Achl_2473 | Achl_1545 | Achl_2473 | Achl_1545 | KEGG: art:Arth_2751 hypothetical protein. | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: aau:AAur_1684 hypothetical protein. | 0.676 |