STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Achl_2645KEGG: art:Arth_2930 hypothetical protein. (319 aa)    
Predicted Functional Partners:
Achl_2646
PFAM: SAF domain protein; KEGG: art:Arth_2931 hypothetical protein.
 
  
 0.957
Achl_2647
KEGG: art:Arth_2932 Flp pilus assembly protein ATPase CpaE-like protein.
 
  
 0.957
Achl_2644
PFAM: TadE family protein; KEGG: art:Arth_2929 TadE family protein.
 
     0.950
Achl_2649
PFAM: type II secretion system protein; KEGG: art:Arth_2934 type II secretion system protein.
 
  
 0.945
Achl_2650
PFAM: type II secretion system protein; KEGG: art:Arth_2935 type II secretion system protein.
 
    0.944
Achl_2643
PFAM: Flp/Fap pilin component; KEGG: bbr:BB1821 hypothetical protein.
 
  
 0.907
Achl_2637
KEGG: art:Arth_2923 hypothetical protein.
 
  
 0.901
Achl_2638
KEGG: aau:AAur_2911 putative flp pilus assembly protein CpaE.
 
  
 0.901
Achl_2648
PFAM: type II secretion system protein E; KEGG: art:Arth_2933 type II secretion system protein E.
 
    0.878
Achl_2640
PFAM: type II secretion system protein; KEGG: aau:AAur_2913 type II secretion system protein F.
 
  
 0.869
Your Current Organism:
Pseudarthrobacter chlorophenolicus
NCBI taxonomy Id: 452863
Other names: Arthrobacter chlorophenolicus A6, P. chlorophenolicus A6, Pseudarthrobacter chlorophenolicus A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.