STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Achl_3208Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (302 aa)    
Predicted Functional Partners:
Achl_3455
TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: art:Arth_3733 transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.989
Achl_3440
Allantoinase; KEGG: art:Arth_3693 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3.
 
  
 0.881
Achl_3454
TIGRFAM: OHCU decarboxylase; KEGG: art:Arth_3732 hypothetical protein.
 
   
 0.851
Achl_3209
TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: art:Arth_3428 uracil-xanthine permease.
 
  
 0.827
Achl_3213
KEGG: art:Arth_3434 hypothetical protein.
 
     0.805
Achl_3200
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: art:Arth_3420 xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
 0.737
Achl_3205
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: art:Arth_3425 hydroxydechloroatrazine ethylaminohydrolase.
 
  
 0.661
Achl_3436
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: aau:AAur_3506 putative hydroxypyruvate isomerase; Belongs to the hyi family.
 
     0.537
Achl_3201
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: art:Arth_3421 molybdopterin dehydrogenase, FAD-binding.
 
   
 0.490
Achl_3194
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: art:Arth_3413 permease for cytosine/purines, uracil, thiamine, allantoin.
 
  
 0.435
Your Current Organism:
Pseudarthrobacter chlorophenolicus
NCBI taxonomy Id: 452863
Other names: Arthrobacter chlorophenolicus A6, P. chlorophenolicus A6, Pseudarthrobacter chlorophenolicus A6
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