STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MQC8NmrA domain-containing protein. (314 aa)    
Predicted Functional Partners:
A0A0E0QPJ8
Uncharacterized protein.
   
 
 0.628
A0A0E0N930
Peroxisomal membrane protein PEX16.
     
 0.618
A0A0E0QKS1
TPR_REGION domain-containing protein.
     
 0.615
A0A0E0QB25
Uncharacterized protein.
     
 0.597
A0A0E0R072
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.576
A0A0E0MWY6
Uncharacterized protein; Belongs to the TPP enzyme family.
     
 0.544
A0A0E0N823
Uncharacterized protein.
    
 0.540
A0A0E0PGG6
Uncharacterized protein.
    
 0.540
A0A0E0NBY4
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.522
A0A0E0NSV9
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.522
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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