STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MSB2Uncharacterized protein. (77 aa)    
Predicted Functional Partners:
A0A0E0NIA0
DUF641 domain-containing protein.
  
     0.540
A0A0E0PUJ7
Uncharacterized protein.
  
     0.538
A0A0E0PRE2
Uncharacterized protein.
  
     0.497
A0A0E0MTQ0
Uncharacterized protein.
  
     0.490
A0A0E0QDS2
Uncharacterized protein.
  
     0.490
A0A0E0PEK4
Uncharacterized protein.
  
     0.488
A0A0E0PEK5
Uncharacterized protein.
  
     0.487
A0A0E0R1A1
Uncharacterized protein.
  
     0.485
A0A0E0PEK6
Uncharacterized protein.
  
     0.481
A0A0E0NFY2
Uncharacterized protein.
  
     0.478
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.