STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MSH6Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)    
Predicted Functional Partners:
A0A0E0QDL9
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
0.994
A0A0E0MV79
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.991
A0A0E0R4P3
Syntaxin-6_N domain-containing protein; Belongs to the universal ribosomal protein uL3 family.
   
 0.990
A0A0E0P1H6
FCP1 homology domain-containing protein; Belongs to the universal ribosomal protein uL13 family.
   
 0.989
A0A0E0RIW5
Ribosomal_L2_C domain-containing protein.
   
 0.988
A0A0E0NMD9
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.981
A0A0E0N0R8
Uncharacterized protein.
   
 
 0.976
A0A0E0QDY5
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.976
A0A0E0RDD2
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.976
A0A0E0QZ08
Uncharacterized protein.
   
 
 0.975
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.