STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MYN4Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
A0A0E0QKS3
Cir_N domain-containing protein.
   
 0.981
A0A0E0Q8S6
Uncharacterized protein.
   
 0.975
A0A0E0MX02
MI domain-containing protein.
    
 0.941
A0A0E0R4B3
Purple acid phosphatase.
    
 0.941
A0A0E0NDU8
WD_REPEATS_REGION domain-containing protein.
    
 0.940
A0A0E0NW60
WD_REPEATS_REGION domain-containing protein.
    
 0.940
A0A0E0NUT0
WD_REPEATS_REGION domain-containing protein.
    
 
 0.925
A0A0E0P7N3
Uncharacterized protein.
    
 
 0.925
A0A0E0NHG1
Uncharacterized protein.
    
 
 0.918
A0A0E0PZZ8
Tr-type G domain-containing protein.
    
 
 0.917
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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