STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0N078UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (332 aa)    
Predicted Functional Partners:
A0A0E0PGV6
HECT domain-containing protein.
    
 0.927
A0A0E0PNN1
HECT domain-containing protein.
    
 0.927
A0A0E0N8G3
HECT domain-containing protein.
    
 0.924
A0A0E0PM20
Uncharacterized protein.
    
 0.883
A0A0E0MQD2
RING-type domain-containing protein.
    
 0.851
A0A0E0MVN0
Ubiquitin-like domain-containing protein.
    
 0.840
A0A0E0PHV9
Ubiquitin-like domain-containing protein.
    
 0.840
A0A0E0NTY4
Uncharacterized protein.
    
 0.819
A0A0E0Q747
RING-type domain-containing protein.
    
 0.819
A0A0E0N714
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
    
0.806
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.