STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0N3Z7Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family. (453 aa)    
Predicted Functional Partners:
A0A0E0MXQ5
Cupin_2 domain-containing protein.
  
 
 0.774
A0A0E0QR88
Uncharacterized protein.
  
 
 0.774
A0A0E0Q1R8
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.724
A0A0E0PC22
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.716
A0A0E0N8M3
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.714
A0A0E0PX38
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.712
A0A0E0P9L5
Endoglucanase.
     
 0.708
A0A0E0Q109
GMC_OxRdtase_N domain-containing protein.
     
 0.708
A0A0E0PAL8
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.707
A0A0E0N5G5
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
     
 0.705
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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