STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0N7P5Response regulatory domain-containing protein. (232 aa)    
Predicted Functional Partners:
A0A0E0N6Z3
Uncharacterized protein.
  
 
 
 0.573
A0A0E0P0I0
Uncharacterized protein.
  
 
 
 0.571
A0A0E0QY47
Uncharacterized protein.
  
 
 
 0.552
A0A0E0QMB3
HPt domain-containing protein.
    
 0.508
A0A0E0NKQ6
Uncharacterized protein.
  
 
 
 0.503
A0A0E0P983
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.485
A0A0E0P2Q1
Uncharacterized protein.
    
 0.442
A0A0E0QZ48
Uncharacterized protein.
    
 0.442
A0A0E0NJW8
Uncharacterized protein.
    
 0.440
A0A0E0MSA0
Uncharacterized protein.
    
 0.433
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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