STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NA75Uncharacterized protein. (2379 aa)    
Predicted Functional Partners:
A0A0E0PPD4
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.925
A0A0E0R9H6
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.925
A0A0E0NZ28
Uncharacterized protein.
    
 
 0.906
A0A0E0PWJ5
Uncharacterized protein.
    
 
 0.906
A0A0E0QRL9
Uncharacterized protein.
    
 
 0.906
A0A0E0QZF5
Uncharacterized protein.
    
 
 0.906
A0A0E0RJ76
Uncharacterized protein.
    
 
 0.906
A0A0E0MZW0
Uncharacterized protein.
    
 
 0.810
A0A0E0NJY3
Uncharacterized protein.
    
 
 0.810
A0A0E0PRM6
Uncharacterized protein.
    
 
 0.810
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.