STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NBR7Aminopeptidase. (879 aa)    
Predicted Functional Partners:
A0A0E0NJG8
M20_dimer domain-containing protein.
   
 0.852
A0A0E0NRK6
PALP domain-containing protein.
    
 0.774
A0A0E0MVN3
Dihydrolipoyl dehydrogenase.
  
 0.754
A0A0E0MVT4
Dihydrolipoyl dehydrogenase.
  
 0.754
A0A0E0NZ57
Pyr_redox domain-containing protein.
  
 0.754
A0A0E0PHS6
Dihydrolipoyl dehydrogenase.
  
 0.754
A0A0E0PHV7
Dihydrolipoyl dehydrogenase.
  
 0.754
A0A0E0NM33
CYTOSOL_AP domain-containing protein.
  
 0.751
A0A0E0RGQ4
CYTOSOL_AP domain-containing protein.
  
 0.751
A0A0E0NMP0
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.750
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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