STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NCQ4Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
A0A0E0PBP2
Knot1 domain-containing protein; Belongs to the DEFL family.
  
     0.485
A0A0E0QSK8
NPH3 domain-containing protein; Belongs to the NPH3 family.
  
     0.475
A0A0E0NP79
Knot1 domain-containing protein; Belongs to the DEFL family.
  
     0.474
A0A0E0P5M8
Knot1 domain-containing protein; Belongs to the DEFL family.
  
     0.470
A0A0E0P5N1
Knot1 domain-containing protein; Belongs to the DEFL family.
  
     0.462
A0A0E0QTI8
Uncharacterized protein.
  
     0.460
A0A0E0RD80
VQ domain-containing protein.
  
     0.450
A0A0E0NBJ7
Knot1 domain-containing protein; Belongs to the DEFL family.
  
     0.446
A0A0E0Q8W1
Uncharacterized protein.
  
     0.445
A0A0E0N2U8
Uncharacterized protein.
  
     0.439
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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