STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NFV0Poly [ADP-ribose] polymerase. (814 aa)    
Predicted Functional Partners:
A0A0E0Q753
Poly [ADP-ribose] polymerase.
  
  
0.936
A0A0E0MW16
Poly [ADP-ribose] polymerase.
     
0.934
A0A0E0P3S8
Uncharacterized protein.
    
 0.928
A0A0E0Q4Y2
Ku domain-containing protein.
    
 
 0.873
A0A0E0MW15
Poly [ADP-ribose] polymerase.
     
0.863
A0A0E0P442
Ku domain-containing protein.
   
 
 0.834
A0A0E0QJ91
BHD_3 domain-containing protein.
    
 0.775
A0A0E0MRS3
Tower domain-containing protein.
    
 0.766
A0A0E0PVK3
Uncharacterized protein.
    
 0.746
A0A0E0PTF1
BRCT domain-containing protein.
    
 
 0.734
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.