STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NH77Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (292 aa)    
Predicted Functional Partners:
A0A0E0P3G9
PUM-HD domain-containing protein.
   
 
 0.957
A0A0E0RHA6
Uncharacterized protein.
   
 
 0.948
A0A0E0N8U2
Uncharacterized protein; Belongs to the NOB1 family.
   
  
 0.936
A0A0E0NEN8
Uncharacterized protein.
   
 
 0.936
A0A0E0QIY1
RRM domain-containing protein.
   
   0.932
A0A0E0QQ80
Uncharacterized protein.
   
 
 0.932
A0A0E0PF48
Uncharacterized protein.
   
 
 0.929
A0A0E0PT80
Brix domain-containing protein.
   
   0.924
A0A0E0MX71
Brix domain-containing protein.
   
   0.920
A0A0E0NVM8
Uncharacterized protein.
   
 
 0.920
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.