STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NHN5Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (336 aa)    
Predicted Functional Partners:
A0A0E0NPS4
Uncharacterized protein.
   
 0.776
A0A0E0NRB0
WD_REPEATS_REGION domain-containing protein.
    
 0.734
A0A0E0NJW8
Uncharacterized protein.
   
0.668
A0A0E0QBJ2
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.664
A0A0E0QE42
WD_REPEATS_REGION domain-containing protein.
   
 0.659
A0A0E0QE45
WD_REPEATS_REGION domain-containing protein.
   
 0.659
A0A0E0MVN0
Ubiquitin-like domain-containing protein.
    
  0.624
A0A0E0PHV9
Ubiquitin-like domain-containing protein.
    
  0.624
A0A0E0P575
VEFS-Box domain-containing protein.
    
 0.615
A0A0E0QPG7
VEFS-Box domain-containing protein.
    
 0.615
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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