STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NKL4Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
A0A0E0PFC8
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.819
A0A0E0N0Q7
Uncharacterized protein.
    
 0.727
A0A0E0QA45
Uncharacterized protein.
   
 0.665
A0A0E0QJ91
BHD_3 domain-containing protein.
    
 0.659
A0A0E0N3R6
GHMP_kinases_N domain-containing protein.
     
 0.638
A0A0E0P0C5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.624
A0A0E0NL88
Peptidylprolyl isomerase.
   
 0.623
A0A0E0MQD3
Uncharacterized protein.
    
 0.573
A0A0E0MSW1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
    
 0.573
A0A0E0MSW4
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.573
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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