STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NLM0C2H2-type domain-containing protein. (279 aa)    
Predicted Functional Partners:
A0A0E0NVT0
BHLH domain-containing protein.
  
   
 0.506
A0A0E0PRV7
Zinc_ribbon_12 domain-containing protein.
  
     0.503
A0A0E0P1P3
Uncharacterized protein.
  
     0.502
A0A0E0Q686
LEA_2 domain-containing protein.
  
     0.500
A0A0E0R1B7
CRM domain-containing protein.
  
     0.497
A0A0E0RHF4
GTD-binding domain-containing protein.
  
     0.492
A0A0E0QP97
Uncharacterized protein.
  
     0.490
A0A0E0MSL7
LEA_2 domain-containing protein.
  
     0.484
A0A0E0PH33
Uncharacterized protein.
  
     0.482
A0A0E0NVY7
Uncharacterized protein.
  
     0.481
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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