STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NNR0S1-like domain-containing protein. (167 aa)    
Predicted Functional Partners:
A0A0E0Q4D2
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 
 0.933
A0A0E0NMD9
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.908
A0A0E0PR43
B5 domain-containing protein.
   
 
 0.850
A0A0E0P2K9
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.839
A0A0E0Q4X5
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.839
A0A0E0N8U2
Uncharacterized protein; Belongs to the NOB1 family.
   
 
 0.828
A0A0E0P061
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
    
   0.798
A0A0E0P2G4
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
    
   0.798
A0A0E0Q4N6
Uncharacterized protein.
    
   0.798
A0A0E0QZ08
Uncharacterized protein.
    
 
 0.791
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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