STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NNR1Protein kinase domain-containing protein. (660 aa)    
Predicted Functional Partners:
A0A0E0Q0Z8
Uncharacterized protein.
   
 
 0.897
A0A0E0P745
J domain-containing protein.
    
 
 0.896
A0A0E0NE54
Uncharacterized protein.
    
 
 0.892
A0A0E0NQD4
Uncharacterized protein.
    
 0.692
A0A0E0NVC2
Uncharacterized protein.
    
 0.692
A0A0E0QAG8
Uncharacterized protein.
    
 0.692
A0A0E0QC05
Uncharacterized protein.
    
 0.692
A0A0E0MY54
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.658
A0A0E0R325
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.658
A0A0E0RCK2
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.658
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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