STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NWU8Uncharacterized protein. (327 aa)    
Predicted Functional Partners:
A0A0E0QEQ6
RNA_pol_sigma70 domain-containing protein.
      
 0.475
A0A0E0RG71
Histidine kinase domain-containing protein.
      
 0.475
A0A0E0PTH9
DUF1995 domain-containing protein.
  
     0.464
A0A0E0NPE3
Uncharacterized protein.
  
    0.461
A0A0E0R1I9
Uncharacterized protein.
  
     0.440
A0A0E0NCK9
Rhodanese domain-containing protein.
      
 0.431
A0A0E0N886
MlaD domain-containing protein.
  
     0.415
A0A0E0PW41
CAAD domain-containing protein.
  
     0.414
A0A0E0NL85
CAAD domain-containing protein.
  
     0.405
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.