STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0NZK4Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
A0A0E0PVY5
Uncharacterized protein.
   
 0.956
A0A0E0PFC8
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.949
A0A0E0NLV8
Uncharacterized protein.
    
 0.944
A0A0E0PRP9
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.923
A0A0E0NS51
TPR_REGION domain-containing protein.
    
 0.919
A0A0E0PAQ4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.906
A0A0E0R8F8
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.901
A0A0E0RGW7
DHFR domain-containing protein.
    
 0.901
A0A0E0MSD3
WD_REPEATS_REGION domain-containing protein.
    
 0.893
A0A0E0PL73
APC1_C domain-containing protein.
    
 0.889
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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