STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0P0D0DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)    
Predicted Functional Partners:
A0A0E0Q037
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
A0A0E0R0W2
Uncharacterized protein.
   
 0.999
A0A0E0RAV6
Uncharacterized protein.
   
 0.999
A0A0E0R5W6
Uncharacterized protein.
  
 0.997
A0A0E0REU1
RNA_pol_L_2 domain-containing protein.
  
 0.997
A0A0E0Q1V9
Uncharacterized protein.
   
 0.995
A0A0E0PU12
Uncharacterized protein.
   
 0.994
A0A0E0RI71
Uncharacterized protein.
   
 0.994
A0A0E0P3V1
Uncharacterized protein.
   
 0.992
A0A0E0Q243
Uncharacterized protein.
   
 0.992
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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