STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0P1F5J domain-containing protein. (613 aa)    
Predicted Functional Partners:
A0A0E0P862
SWIB domain-containing protein.
   
 0.994
A0A0E0QB37
BAF250_C domain-containing protein.
  
 
 0.993
A0A0E0QE43
Uncharacterized protein; Belongs to the actin family.
   
 0.993
A0A0E0QUK2
Uncharacterized protein.
   
 
 0.951
A0A0E0N5X7
Uncharacterized protein.
   
 0.945
A0A0E0NEQ7
Uncharacterized protein.
   
 
 0.945
A0A0E0PMN4
Uncharacterized protein.
   
 0.945
A0A0E0PVY5
Uncharacterized protein.
    
 0.926
A0A0E0NB42
Uncharacterized protein.
   
 0.916
A0A0E0NS63
Uncharacterized protein.
   
 0.916
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.