STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0P1K5eIF-5a domain-containing protein. (218 aa)    
Predicted Functional Partners:
A0A0E0P1H6
FCP1 homology domain-containing protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.977
A0A0E0QZ08
Uncharacterized protein.
   
 
 0.958
A0A0E0P2K9
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.953
A0A0E0Q4X5
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.953
A0A0E0ND75
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.952
A0A0E0NR26
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.952
A0A0E0NPH2
Uncharacterized protein.
  
 
 0.951
A0A0E0R053
Uncharacterized protein.
  
 
 0.951
A0A0E0R8E2
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.951
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
  
 
 0.951
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.