STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0P259Amino_oxidase domain-containing protein. (377 aa)    
Predicted Functional Partners:
A0A0E0PLC9
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.884
A0A0E0QPC8
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.874
A0A0E0MUV6
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.826
A0A0E0PAV8
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.826
A0A0E0MZE6
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.790
A0A0E0NUT6
Uroporphyrinogen_deCOase domain-containing protein.
     
 0.790
A0A0E0P8N3
HIRAN domain-containing protein.
      
 0.426
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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