STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0P5Z9DUF4220 domain-containing protein. (744 aa)    
Predicted Functional Partners:
A0A0E0PYW3
Uncharacterized protein.
  
 
  0.629
A0A0E0QJ84
DUF295 domain-containing protein.
  
 
  0.625
A0A0E0NMA7
DUF295 domain-containing protein.
  
 
  0.606
A0A0E0NXY7
Uncharacterized protein.
  
 
  0.603
A0A0E0NXY1
Uncharacterized protein.
  
 
  0.601
A0A0E0RAE6
DUF295 domain-containing protein.
  
 
  0.599
A0A0E0QER8
Uncharacterized protein.
  
 
  0.598
A0A0E0P435
F-box domain-containing protein.
  
 
  0.587
A0A0E0R6U4
Uncharacterized protein.
  
  0.585
A0A0E0R4H4
Uncharacterized protein.
  
 
   0.579
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.