STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PAW2Uncharacterized protein. (562 aa)    
Predicted Functional Partners:
A0A0E0NUB4
VQ domain-containing protein.
    
 0.646
A0A0E0Q1A6
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.646
A0A0E0Q5F4
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.646
A0A0E0R9E6
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.646
A0A0E0RIT1
AMP_N domain-containing protein.
    
 0.646
A0A0E0N262
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 
  0.532
A0A0E0R8F6
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
  
 0.474
A0A0E0PWQ9
Uncharacterized protein.
  
     0.419
A0A0E0NKA5
Uncharacterized protein.
  
     0.414
A0A0E0PC94
Uncharacterized protein.
  
     0.408
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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