STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PCL0Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
A0A0E0PAT5
C3H1-type domain-containing protein.
  
     0.542
A0A0E0NWX4
Uncharacterized protein.
  
     0.541
A0A0E0PBE0
Uncharacterized protein.
  
     0.541
prog1
Zinc-finger nuclear transcription factor PROG1.
  
     0.537
A0A0E0MUQ2
Uncharacterized protein.
  
     0.534
A0A0E0PUJ6
Uncharacterized protein.
  
     0.533
A0A0E0MRA5
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.
  
     0.530
A0A0E0QI09
Uncharacterized protein.
  
     0.529
A0A0E0NWN0
Uncharacterized protein.
  
     0.527
A0A0E0QAT6
Aa_trans domain-containing protein.
  
     0.526
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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