STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PD01Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
A0A0E0R8F8
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.892
A0A0E0RGW7
DHFR domain-containing protein.
   
 
 0.892
A0A0E0PSK2
Uncharacterized protein.
  
 0.747
A0A0E0NTT9
PKS_AT domain-containing protein.
  
 0.716
A0A0E0QUK8
Uncharacterized protein.
  
 0.716
A0A0E0NLH4
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.697
A0A0E0QK46
FAD-binding FR-type domain-containing protein.
  
 0.697
A0A0E0QK48
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.697
A0A0E0PQZ3
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.689
A0A0E0PUZ4
SCP2 domain-containing protein.
  
 0.689
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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