STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PD71F-box domain-containing protein. (334 aa)    
Predicted Functional Partners:
A0A0E0RBD2
DUF4220 domain-containing protein.
  
 
  0.571
A0A0E0NCA7
DUF4220 domain-containing protein.
  
 
  0.569
A0A0E0RBD7
DUF4220 domain-containing protein.
  
 
  0.568
A0A0E0N7Q3
DUF4220 domain-containing protein.
  
 
  0.542
A0A0E0Q2B2
DUF4220 domain-containing protein.
  
 
  0.541
A0A0E0N3N8
DUF4220 domain-containing protein.
  
 
  0.531
A0A0E0PQN9
DUF4220 domain-containing protein.
  
 
  0.526
A0A0E0P4Z7
DUF4220 domain-containing protein.
  
 
  0.517
A0A0E0QY01
DUF4220 domain-containing protein.
  
 
  0.511
A0A0E0R4Z1
Uncharacterized protein.
    
 0.508
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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