STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PDI0TFIIS N-terminal domain-containing protein. (146 aa)    
Predicted Functional Partners:
A0A0E0Q4M5
RNA_pol_L_2 domain-containing protein.
   
 0.940
A0A0E0QMT5
RPOLD domain-containing protein.
   
 0.931
A0A0E0N8V7
RPOL4c domain-containing protein.
   
 0.930
A0A0E0QBG7
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.923
A0A0E0RAV6
Uncharacterized protein.
   
 0.923
A0A0E0PAC0
Uncharacterized protein.
   
 0.916
A0A0E0PV37
Uncharacterized protein.
   
 0.915
A0A0E0R5W6
Uncharacterized protein.
  
 0.906
A0A0E0REU1
RNA_pol_L_2 domain-containing protein.
  
 0.906
A0A0E0QGK6
Uncharacterized protein.
   
 0.902
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
Server load: low (18%) [HD]