STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PFB5Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
A0A0E0NKB1
Uncharacterized protein.
   
 0.883
A0A0E0P1F5
J domain-containing protein.
   
 0.883
A0A0E0QB37
BAF250_C domain-containing protein.
    
 0.876
A0A0E0QUK2
Uncharacterized protein.
    
 
 0.772
A0A0E0NEQ7
Uncharacterized protein.
    
 
 0.740
A0A0E0PVY5
Uncharacterized protein.
    
 0.710
A0A0E0NB42
Uncharacterized protein.
    
 0.706
A0A0E0NS63
Uncharacterized protein.
    
 0.706
A0A0E0P0L6
Uncharacterized protein.
    
 0.706
A0A0E0P4H2
Uncharacterized protein.
    
 0.706
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.